Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamate--trna ligase | K8M09_14180 | P15189 | + | 2864120 - 2865577 | 54522.0 |
| lysine--trna ligase | K8M09_14185 | B5ZQW5 | + | 2865591 - 2867084 | 56456.4 |
| hybrid-cluster nad(p)-dependent oxidoreductase | K8M09_14190 | P75824 | - | 2867150 - 2868247 | 40092.1 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | K8M09_14195 | Q52438 | - | 2868249 - 2869493 | 47092.6 |
| hypothetical protein | K8M09_14200 | Not Available | + | 2870085 - 2870693 | 23401.1 |
| diguanylate cyclase | K8M09_14205 | Q9KKZ4 | - | 2870700 - 2871749 | 37999.3 |
| threonylcarbamoyl-amp synthase | K8M09_14210 | Q9UYB2 | + | 2871892 - 2872866 | 33734.7 |
| fad-binding oxidoreductase | K8M09_14215 | P46681 | + | 2872875 - 2874305 | 50361.6 |
| duf1217 domain-containing protein | K8M09_14220 | Not Available | - | 2874306 - 2876630 | 84723.6 |
| duf6101 family protein | K8M09_14225 | Not Available | + | 2876926 - 2877489 | 20827.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.