Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase | K8M09_14130 | C3M8Y0 | - | 2851435 - 2852745 | 48484.2 |
| xylulokinase | K8M09_14135 | P09099 | - | 2852773 - 2854227 | 51089.4 |
| laci family dna-binding transcriptional regulator | K8M09_14140 | P36944 | - | 2854237 - 2855280 | 35799.1 |
| metallophosphoesterase | K8M09_14145 | Not Available | - | 2855369 - 2856451 | 38906.5 |
| dha2 family efflux mfs transporter permease subunit | K8M09_14150 | P0DPR7 | - | 2856557 - 2858110 | 56252.6 |
| hlyd family secretion protein | K8M09_14155 | P0DPR6 | - | 2858173 - 2859342 | 40426.9 |
| tetr/acrr family transcriptional regulator | K8M09_14160 | Q8NQ97 | + | 2859489 - 2860148 | 24317.4 |
| arac family transcriptional regulator | K8M09_14165 | P0ACI1 | + | 2860194 - 2861072 | 32286.4 |
| terc family protein | K8M09_14170 | P0AEC2 | + | 2861170 - 2861919 | 26868.0 |
| slc13 family permease | K8M09_14175 | P72958 | + | 2862213 - 2863985 | 61993.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.