Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K8M09_13980 | Not Available | - | 2819689 - 2820453 | 29105.9 |
| eal domain-containing protein | K8M09_13985 | Q9ABX9 | - | 2820638 - 2822947 | 86257.1 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | K8M09_13990 | Q8X7G2 | + | 2823393 - 2824172 | 27665.8 |
| hypothetical protein | K8M09_13995 | Not Available | - | 2824177 - 2824584 | 14009.3 |
| 2-hydroxyacid dehydrogenase | K8M09_14000 | A5CAL1 | - | 2824666 - 2825634 | 34268.4 |
| laci family transcriptional regulator | K8M09_14005 | P0ACN9 | - | 2825647 - 2826675 | 36824.1 |
| marr family transcriptional regulator | K8M09_14010 | P94578 | - | 2826733 - 2827269 | 18759.5 |
| creatininase family protein | K8M09_14015 | A0QSC0 | + | 2827364 - 2828155 | 28474.3 |
| gtp-binding protein | K8M09_14020 | Q8IUF1 | + | 2828300 - 2829439 | 43003.4 |
| wd40 repeat domain-containing protein | K8M09_14025 | Not Available | + | 2829498 - 2830487 | 34631.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.