Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| maoc family dehydratase | K8M09_13930 | P08634 | + | 2810924 - 2811412 | 18164.6 |
| gnat family n-acetyltransferase | K8M09_13935 | P37506 | + | 2811409 - 2811933 | 19480.1 |
| sarcosine oxidase subunit gamma | K8M09_13940 | Q46338 | - | 2811938 - 2812486 | 18795.3 |
| sarcosine oxidase subunit alpha | K8M09_13945 | O87386 | - | 2812479 - 2815472 | 108000.0 |
| sarcosine oxidase subunit delta | K8M09_13950 | Q46336 | - | 2815469 - 2815801 | 12533.6 |
| hypothetical protein | K8M09_13955 | Not Available | - | 2815805 - 2816164 | 13164.0 |
| sarcosine oxidase subunit beta family protein | K8M09_13960 | Q52671 | - | 2816175 - 2817428 | 45464.4 |
| 30s ribosomal protein s21 | K8M09_13965 | A6WYQ4 | + | 2817757 - 2817984 | 8925.07 |
| tetratricopeptide repeat protein | K8M09_13970 | Not Available | + | 2818263 - 2819102 | 30457.3 |
| aa3-type cytochrome c oxidase subunit iv | K8M09_13975 | Not Available | - | 2819218 - 2819442 | 8107.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.