Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase large subunit | K8M09_13780 | P55037 | - | 2768435 - 2773159 | 172494.0 |
| low specificity l-threonine aldolase | K8M09_13785 | O50584 | + | 2773641 - 2774687 | 37241.0 |
| hsp20 family protein | K8M09_13790 | A8ACK0 | - | 2774745 - 2775206 | 17468.6 |
| alpha/beta hydrolase | K8M09_13795 | P59588 | + | 2775635 - 2776597 | 35243.2 |
| histidinol-phosphatase | K8M09_13800 | Q6NPM8 | - | 2776621 - 2777394 | 27808.2 |
| n-formylglutamate amidohydrolase | K8M09_13805 | Q9HU92 | - | 2777651 - 2778535 | 32577.9 |
| response regulator cpdr1 | K8M09_13810 | Q2YIF7 | + | 2778728 - 2779090 | 13455.3 |
| Trna-val | Not Available | Not Available | + | 2779185 - 2779259 | Not Available |
| hypothetical protein | K8M09_13820 | Not Available | - | 2779324 - 2779722 | 14112.3 |
| purine permease | K8M09_13825 | Q46821 | + | 2780064 - 2781548 | 51571.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.