Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5'-nucleotidase c-terminal domain-containing protein | K8M09_13730 | P29240 | + | 2755971 - 2757824 | 64665.5 |
| ferrochelatase | K8M09_13735 | Q92M52 | + | 2757950 - 2758978 | 39030.8 |
| spfh/band 7/phb domain protein | K8M09_13740 | P0AA55 | + | 2759068 - 2760093 | 36889.5 |
| nfed family protein | K8M09_13745 | P0AAS3 | + | 2760096 - 2760563 | 16955.7 |
| kpsf/gutq family sugar-phosphate isomerase | K8M09_13750 | Q9HVW0 | - | 2760560 - 2761555 | 34398.8 |
| outer membrane beta-barrel protein | K8M09_13755 | Not Available | + | 2761704 - 2763167 | 52091.4 |
| utp--glucose-1-phosphate uridylyltransferase galu | K8M09_13760 | P33696 | - | 2763171 - 2764058 | 32336.3 |
| lytic murein transglycosylase | K8M09_13765 | P41052 | + | 2764258 - 2765478 | 44547.0 |
| duf459 domain-containing protein | K8M09_13770 | Not Available | + | 2765615 - 2766772 | 41248.6 |
| glutamate synthase subunit beta | K8M09_13775 | P9WN18 | - | 2766838 - 2768295 | 53161.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.