Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| metalloregulator arsr/smtb family transcription factor | K8M09_13630 | O53478 | + | 2738023 - 2738283 | 9819.76 |
| duf465 domain-containing protein | K8M09_13635 | Not Available | - | 2738477 - 2738650 | 6599.91 |
| duf465 domain-containing protein | K8M09_13640 | Not Available | + | 2738867 - 2739070 | 7705.47 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | K8M09_13645 | P52558 | + | 2739121 - 2739588 | 15948.1 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | K8M09_13650 | P52559 | + | 2739585 - 2740643 | 37899.4 |
| type b 50s ribosomal protein l36 | K8M09_13655 | P68993 | + | 2740792 - 2740917 | 4990.29 |
| hypothetical protein | K8M09_13660 | Q2K4E6 | + | 2741001 - 2741603 | 22394.6 |
| alpha/beta hydrolase | K8M09_13665 | P27747 | + | 2741679 - 2742686 | 36576.1 |
| pyruvate kinase | K8M09_13670 | O05118 | - | 2742693 - 2744132 | 51274.2 |
| duf1036 domain-containing protein | K8M09_13675 | Not Available | - | 2744132 - 2744638 | 18594.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.