Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transaldolase | K8M09_13530 | B3Q0T5 | + | 2718433 - 2719395 | 34332.2 |
| Ncrna_class:other | Not Available | Not Available | + | 2719464 - 2719622 | Not Available |
| cell division protein zapa | K8M09_13540 | Not Available | - | 2719728 - 2720099 | 13453.1 |
| duf4164 domain-containing protein | K8M09_13545 | Not Available | - | 2720120 - 2720392 | 10482.3 |
| transketolase | K8M09_13550 | P51010 | + | 2720724 - 2722706 | 71087.5 |
| type i glyceraldehyde-3-phosphate dehydrogenase | K8M09_13555 | P29272 | + | 2722775 - 2723776 | 35651.6 |
| phosphoglycerate kinase | K8M09_13560 | C3MIJ2 | + | 2723853 - 2725052 | 41597.1 |
| hypothetical protein | K8M09_13565 | Not Available | - | 2725287 - 2725442 | 5674.65 |
| mfs transporter | K8M09_13570 | B7LN63 | + | 2725594 - 2726871 | 44789.8 |
| duf1192 domain-containing protein | K8M09_13575 | Not Available | + | 2726868 - 2727056 | 6932.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.