Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system vapc family toxin | K8M09_13480 | Not Available | - | 2711327 - 2711743 | 15542.7 |
| abrb/maze/spovt family dna-binding domain-containing protein | K8M09_13485 | Not Available | - | 2711724 - 2711984 | 9717.34 |
| crossover junction endodeoxyribonuclease ruvc | K8M09_13490 | C3MIH7 | - | 2712040 - 2712552 | 18020.0 |
| llm class flavin-dependent oxidoreductase | K8M09_13495 | O32254 | + | 2712712 - 2713713 | 36069.6 |
| yebc/pmpr family dna-binding transcriptional regulator | K8M09_13500 | Q92M88 | - | 2713772 - 2714518 | 26690.2 |
| hypothetical protein | K8M09_13505 | Not Available | - | 2714689 - 2715186 | 17549.8 |
| ymdb family metallophosphoesterase | K8M09_13510 | O31775 | - | 2715265 - 2716089 | 29443.0 |
| 5-formyltetrahydrofolate cyclo-ligase | K8M09_13515 | P44905 | - | 2716099 - 2716695 | 21417.0 |
| luxr c-terminal-related transcriptional regulator | K8M09_13520 | O34723 | + | 2716882 - 2717106 | 8033.76 |
| sugar-binding transcriptional regulator | K8M09_13525 | Q2YIQ4 | - | 2717166 - 2718149 | 35555.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.