Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tol-pal system protein ybgf | K8M09_13430 | Not Available | - | 2702103 - 2703089 | 34755.5 |
| peptidoglycan-associated lipoprotein pal | K8M09_13435 | Q926C3 | - | 2703242 - 2703781 | 18870.5 |
| tol-pal system beta propeller repeat protein tolb | K8M09_13440 | Q926C2 | - | 2704081 - 2705385 | 48032.9 |
| hypothetical protein | K8M09_13445 | Not Available | - | 2705406 - 2706518 | 39609.7 |
| protein tolr | K8M09_13450 | P50599 | - | 2706528 - 2706980 | 15771.4 |
| protein tolq | K8M09_13455 | P50598 | - | 2707012 - 2707728 | 25485.9 |
| tol-pal system-associated acyl-coa thioesterase | K8M09_13460 | P44679 | - | 2708049 - 2708513 | 17103.7 |
| hypothetical protein | K8M09_13465 | Not Available | - | 2708647 - 2709297 | 22972.0 |
| holliday junction branch migration dna helicase ruvb | K8M09_13470 | A6UCT7 | - | 2709618 - 2710658 | 38279.2 |
| holliday junction branch migration protein ruva | K8M09_13475 | Q92M91 | - | 2710699 - 2711316 | 21292.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.