Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K8M09_13380 | Not Available | - | 2687313 - 2689496 | 76255.3 |
| adenylosuccinate synthase | K8M09_13385 | B9J8Q9 | - | 2689566 - 2690861 | 46609.8 |
| dmt family transporter | K8M09_13390 | O31540 | + | 2691080 - 2691973 | 32554.7 |
| phosphoglycerate dehydrogenase | K8M09_13395 | P35136 | - | 2692054 - 2693649 | 56025.0 |
| phosphoserine transaminase | K8M09_13400 | P52878 | - | 2693725 - 2694906 | 42535.0 |
| porin family protein | K8M09_13405 | Q579D9 | - | 2695084 - 2695818 | 25615.2 |
| porin family protein | K8M09_13410 | Q579D9 | - | 2695994 - 2696809 | 29662.9 |
| phosphoglucosamine mutase | K8M09_13415 | Q1MC77 | - | 2697057 - 2698409 | 48509.6 |
| atp-dependent zinc metalloprotease ftsh | K8M09_13420 | A1URA3 | - | 2698692 - 2700614 | 69808.2 |
| trna lysidine(34) synthetase tils | K8M09_13425 | Q92JY3 | - | 2700805 - 2702082 | 44152.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.