Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cell cycle two-component system response regulator ctra | K8M09_13330 | B2S753 | + | 2679313 - 2680011 | 25856.4 |
| response regulator | K8M09_13335 | P0A4H6 | - | 2680157 - 2680519 | 13233.5 |
| histidine phosphotransferase | K8M09_13340 | Q2YQA5 | - | 2680637 - 2681293 | 23086.7 |
| eipa family protein | K8M09_13345 | Not Available | + | 2681509 - 2682087 | 20363.5 |
| hypothetical protein | K8M09_13350 | Not Available | + | 2682237 - 2683367 | 41610.0 |
| hypothetical protein | K8M09_13355 | Not Available | + | 2683386 - 2683769 | 13489.8 |
| rna methyltransferase | K8M09_13360 | P9WFY3 | - | 2683788 - 2684618 | 28764.0 |
| hypothetical protein | K8M09_13365 | Not Available | - | 2684624 - 2685013 | 13587.6 |
| rlua family pseudouridine synthase | K8M09_13370 | Q45480 | + | 2685049 - 2686092 | 38123.4 |
| rna polymerase sigma factor rpoh | K8M09_13375 | P50507 | + | 2686331 - 2687236 | 34485.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.