Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is21-like element helper atpase istb | K8M09_13280 | P15026 | - | 2670772 - 2671584 | 29807.5 |
| is21 family transposase | K8M09_13285 | Q46087 | - | 2671574 - 2673100 | 58599.3 |
| hypothetical protein | K8M09_13290 | Not Available | - | 2673434 - 2673787 | 12879.3 |
| hypothetical protein | K8M09_13295 | Not Available | - | 2674205 - 2674567 | 13212.4 |
| Trna-met | Not Available | Not Available | + | 2674824 - 2674900 | Not Available |
| trna 2-thiouridine(34) synthase mnma | K8M09_13305 | A6UCQ0 | - | 2675033 - 2676229 | 43374.6 |
| luxr c-terminal-related transcriptional regulator | K8M09_13310 | Q89VI3 | - | 2676402 - 2677154 | 27779.5 |
| duf1153 domain-containing protein | K8M09_13315 | Not Available | + | 2677592 - 2677867 | 10317.4 |
| gnat family n-acetyltransferase | K8M09_13320 | P39274 | + | 2678059 - 2678340 | 10271.3 |
| flagellar export protein flij | K8M09_13325 | Not Available | - | 2678433 - 2678783 | 13388.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.