Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pfkb family carbohydrate kinase | K8M09_13080 | Q53W83 | - | 2622767 - 2623690 | 32377.4 |
| sis domain-containing protein | K8M09_13085 | Q9YCQ6 | - | 2623691 - 2624707 | 34858.0 |
| carbohydrate abc transporter permease | K8M09_13090 | Q7LYX6 | - | 2624710 - 2625555 | 29499.1 |
| sugar abc transporter permease | K8M09_13095 | O51924 | - | 2625555 - 2626439 | 31759.6 |
| extracellular solute-binding protein | K8M09_13100 | Q7LYW7 | - | 2626508 - 2627746 | 44364.5 |
| rok family protein | K8M09_13105 | D2PPN2 | + | 2627890 - 2629095 | 42669.2 |
| dntp triphosphohydrolase | K8M09_13110 | Q55731 | - | 2629092 - 2630435 | 49816.2 |
| sdr family oxidoreductase | K8M09_13115 | Q56841 | - | 2630530 - 2631306 | 26980.5 |
| fadr family transcriptional regulator | K8M09_13120 | P31460 | - | 2631317 - 2632081 | 28299.9 |
| arabinose abc transporter substrate-binding protein | K8M09_13125 | Q1JUP8 | + | 2632288 - 2633271 | 34371.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.