Shinella zoogloeoides 1-16M

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Shinella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusShinella
SpeciesShinella zoogloeoides
Strain1-16M

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shinella zoogloeoides 1-16M

Accession NumberCP086610.1

Gene Summary

Adenine Count

713258 bp

Thymine Count

704761 bp

Guanine Count

1279043 bp

Cytosine Count

1294829 bp

Genome Length

3991891 bp

Protein-coding Genes

3764 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
yeih family proteinK8M09_12980Q92UW5-2597793 - 259879134261.9
sulfoacetaldehyde acetyltransferaseK8M09_12985Q92UW6-2598901 - 260067663802.5
fad-binding oxidoreductaseK8M09_12990P37906-2600715 - 260211551896.3
nuclear transport factor 2 family proteinK8M09_12995Not Available-2602132 - 260251213997.3
abc transporter permease subunitK8M09_13000Q47539-2602620 - 260344729621.3
atp-binding cassette domain-containing proteinK8M09_13005Q92UX0-2603440 - 260425229821.4
taurine abc transporter substrate-binding proteinK8M09_13010Q47537-2604403 - 260541935672.3
plp-dependent aminotransferase family proteinK8M09_13015D5AKX9+2605548 - 260704455001.9
bifunctional aldolase/short-chain dehydrogenaseK8M09_13020P40747-2607131 - 260918273916.0
sugar-binding transcriptional regulatorK8M09_13025P39356+2609369 - 261034935141.4

Displaying genes 2651 – 2660 of 4728 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites