Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | K8M09_12880 | Q00986 | - | 2575895 - 2578216 | 81357.0 |
| ring-cleaving dioxygenase | K8M09_12885 | O34689 | + | 2578538 - 2579491 | 34585.9 |
| nad(p)h-dependent oxidoreductase | K8M09_12890 | Q9I4D4 | + | 2579561 - 2580118 | 19652.8 |
| voc family protein | K8M09_12895 | P96693 | - | 2580176 - 2581732 | 55284.9 |
| hypothetical protein | K8M09_12900 | Not Available | - | 2581971 - 2582189 | 7926.5 |
| efflux transporter outer membrane subunit | K8M09_12905 | P24145 | + | 2582848 - 2584245 | 49505.7 |
| fcd domain-containing protein | K8M09_12910 | P37335 | - | 2584282 - 2584974 | 25071.8 |
| fumarylacetoacetate hydrolase family protein | K8M09_12915 | A9ALD1 | + | 2585092 - 2585931 | 29237.2 |
| hypothetical protein | K8M09_12920 | Not Available | - | 2585991 - 2586152 | 5808.62 |
| hypothetical protein | K8M09_12925 | Not Available | - | 2586265 - 2586903 | 22712.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.