Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | K8M09_12730 | P37511 | + | 2541906 - 2542835 | 33105.9 |
| hth-type transcriptional regulator rutr | K8M09_12735 | Q8X4Z7 | - | 2542839 - 2543489 | 24537.3 |
| zn-dependent hydrolase | K8M09_12740 | Q6DTN4 | + | 2543761 - 2545011 | 44527.2 |
| hypothetical protein | K8M09_12745 | Not Available | + | 2545111 - 2545305 | 7124.31 |
| dihydropyrimidinase | K8M09_12750 | Q9I676 | + | 2545317 - 2546771 | 53025.1 |
| hypothetical protein | K8M09_12755 | Not Available | + | 2546771 - 2547148 | 12872.9 |
| abc transporter atp-binding protein | K8M09_12760 | Q57855 | + | 2547381 - 2548175 | 29166.2 |
| abc transporter permease | K8M09_12765 | Q9K9G6 | + | 2548217 - 2549101 | 31651.9 |
| abc transporter permease | K8M09_12770 | Q57306 | + | 2549098 - 2549967 | 31814.9 |
| abc transporter substrate-binding protein | K8M09_12775 | Q9K9G5 | + | 2549990 - 2550982 | 35670.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.