Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| antibiotic biosynthesis monooxygenase | K8M09_12580 | P38049 | - | 2515281 - 2515595 | 11761.7 |
| hypothetical protein | K8M09_12585 | Not Available | - | 2515611 - 2515871 | 9494.3 |
| duf2325 domain-containing protein | K8M09_12590 | Not Available | - | 2515868 - 2516260 | 14476.1 |
| energy transducer tonb | K8M09_12595 | Not Available | - | 2516658 - 2517551 | 30706.6 |
| hypothetical protein | K8M09_12600 | Not Available | - | 2517610 - 2518041 | 14711.0 |
| hemin-degrading factor | K8M09_12605 | P31517 | + | 2518265 - 2519311 | 38747.0 |
| abc transporter substrate-binding protein | K8M09_12610 | Q56991 | + | 2519377 - 2520327 | 33090.0 |
| iron abc transporter permease | K8M09_12615 | Q56992 | + | 2520365 - 2521435 | 36195.8 |
| heme abc transporter atp-binding protein | K8M09_12620 | Q2K551 | + | 2521440 - 2522228 | 27792.0 |
| duf883 family protein | K8M09_12625 | Not Available | + | 2522329 - 2522715 | 13649.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.