Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arsenate reductase (glutaredoxin) | K8M09_12530 | Q92R44 | + | 2508233 - 2508655 | 15057.2 |
| hypothetical protein | K8M09_12535 | Not Available | - | 2508652 - 2509758 | 39885.6 |
| substrate-binding domain-containing protein | K8M09_12540 | Q9Z3R4 | + | 2510045 - 2511061 | 35996.2 |
| gfo/idh/moca family oxidoreductase | K8M09_12545 | Q92KZ3 | - | 2511062 - 2512105 | 37560.4 |
| thua domain-containing protein | K8M09_12550 | Not Available | - | 2512114 - 2512899 | 29317.7 |
| qace family quaternary ammonium compound efflux smr transporter | K8M09_12555 | P0AGC9 | - | 2513018 - 2513359 | 12145.3 |
| tetr/acrr family transcriptional regulator | K8M09_12560 | Q0S7V2 | - | 2513420 - 2513980 | 20797.2 |
| group ii truncated hemoglobin | K8M09_12565 | O31607 | + | 2514125 - 2514541 | 15685.7 |
| duf423 domain-containing protein | K8M09_12570 | Q2KI29 | + | 2514546 - 2514911 | 12034.0 |
| voc family protein | K8M09_12575 | P17493 | - | 2514913 - 2515284 | 14139.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.