Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transposase | K8M09_12430 | P55481 | - | 2491331 - 2491744 | 15141.3 |
| hypothetical protein | K8M09_12435 | Not Available | + | 2492219 - 2492731 | 19264.1 |
| hypothetical protein | K8M09_12440 | Not Available | + | 2492728 - 2493417 | 25100.1 |
| bacteriophage abortive infection abih family protein | K8M09_12445 | Not Available | + | 2493474 - 2494322 | 32285.6 |
| hypothetical protein | K8M09_12450 | Not Available | + | 2494419 - 2494994 | 21438.1 |
| 7-cyano-7-deazaguanine synthase | K8M09_12455 | B3Q0Y0 | + | 2494991 - 2496376 | 51113.5 |
| xre family transcriptional regulator | K8M09_12460 | Not Available | + | 2496360 - 2497550 | 45008.0 |
| dna-binding protein | K8M09_12465 | Not Available | + | 2497525 - 2498190 | 23918.5 |
| hypothetical protein | K8M09_12470 | Not Available | + | 2498610 - 2499359 | 29498.5 |
| is481 family transposase | K8M09_12475 | P35878 | - | 2499377 - 2499871 | 18958.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.