Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2840 domain-containing protein | K8M09_12330 | Not Available | - | 2472829 - 2473347 | 19508.3 |
| replication initiator protein a | K8M09_12335 | P60119 | - | 2473344 - 2474471 | 42159.2 |
| helix-turn-helix domain-containing protein | K8M09_12340 | Not Available | - | 2474472 - 2474741 | 9939.0 |
| duf2285 domain-containing protein | K8M09_12345 | Not Available | - | 2474877 - 2475401 | 19706.8 |
| duf6499 domain-containing protein | K8M09_12350 | Not Available | - | 2475457 - 2475660 | 8003.42 |
| duf945 domain-containing protein | K8M09_12355 | P18005 | - | 2475964 - 2476806 | 31820.7 |
| abortive infection system antitoxin abigi family protein | K8M09_12360 | Not Available | + | 2477079 - 2477729 | 24546.2 |
| duf736 domain-containing protein | K8M09_12365 | P55425 | - | 2477798 - 2478115 | 11400.3 |
| hypothetical protein | K8M09_12370 | Not Available | + | 2478105 - 2478467 | 12894.4 |
| hypothetical protein | K8M09_12375 | Not Available | + | 2479052 - 2479858 | 29661.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.