Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | K8M09_12180 | P76091 | - | 2440927 - 2441874 | 34551.2 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | K8M09_12185 | Q42670 | - | 2441871 - 2442518 | 23707.9 |
| duf3592 domain-containing protein | K8M09_12190 | Not Available | - | 2442936 - 2443907 | 35310.6 |
| duf2274 domain-containing protein | K8M09_12195 | Not Available | - | 2444075 - 2444290 | 7794.67 |
| trbi/virb10 family protein | K8M09_12200 | P55406 | - | 2444293 - 2445432 | 40038.7 |
| p-type conjugative transfer protein trbg | K8M09_12205 | P55404 | - | 2445429 - 2446388 | 34052.8 |
| conjugal transfer protein trbf | K8M09_12210 | P54914 | - | 2446385 - 2447074 | 25727.5 |
| p-type conjugative transfer protein trbl | K8M09_12215 | P54913 | - | 2447071 - 2448435 | 45361.8 |
| putative entry exclusion protein trbk-alt | K8M09_12220 | Not Available | - | 2448439 - 2448717 | 10104.1 |
| p-type conjugative transfer protein trbj | K8M09_12225 | P54911 | - | 2448728 - 2449495 | 27390.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.