Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K8M09_12080 | Not Available | + | 2424821 - 2425294 | 16869.9 |
| hypothetical protein | K8M09_12085 | Not Available | - | 2425291 - 2425521 | 8476.27 |
| inositol 2-dehydrogenase | K8M09_12090 | O68965 | + | 2425745 - 2426737 | 35202.1 |
| rok family protein | K8M09_12095 | P50456 | - | 2426804 - 2428024 | 43726.8 |
| d-xylose abc transporter substrate-binding protein | K8M09_12100 | P37387 | + | 2428270 - 2429313 | 36177.7 |
| sugar abc transporter permease | K8M09_12105 | P0AGI6 | + | 2429528 - 2430841 | 45932.6 |
| atp-binding cassette domain-containing protein | K8M09_12110 | Q0BFU0 | + | 2430856 - 2431641 | 28123.0 |
| Trna-arg | Not Available | Not Available | + | 2431801 - 2431877 | Not Available |
| is481 family transposase | K8M09_12120 | P10427 | - | 2431854 - 2433506 | 61958.2 |
| marr family transcriptional regulator | K8M09_12125 | Not Available | - | 2433503 - 2433901 | 14546.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.