Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| circularly permuted type 2 atp-grasp protein | K8M09_12030 | Q55587 | + | 2412801 - 2414195 | 51779.3 |
| alpha-e domain-containing protein | K8M09_12035 | P9WL96 | + | 2414200 - 2415141 | 35734.3 |
| transglutaminase family protein | K8M09_12040 | Q49757 | + | 2415156 - 2415980 | 29965.4 |
| hypothetical protein | K8M09_12045 | Not Available | - | 2416116 - 2416772 | 20662.5 |
| aldehyde dehydrogenase family protein | K8M09_12050 | P42236 | - | 2416986 - 2418419 | 50962.9 |
| gguc protein | K8M09_12055 | Not Available | - | 2418477 - 2419472 | 35378.9 |
| sugar abc transporter permease | K8M09_12060 | P45045 | - | 2419599 - 2420807 | 42888.0 |
| sugar abc transporter atp-binding protein | K8M09_12065 | Q9S472 | - | 2420807 - 2422342 | 56590.8 |
| sugar-binding protein | K8M09_12070 | P54082 | - | 2422467 - 2423540 | 38125.4 |
| lysr family transcriptional regulator | K8M09_12075 | P25547 | + | 2423793 - 2424797 | 36125.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.