Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucosidase family protein | K8M09_11880 | Q9Z3R8 | - | 2381131 - 2382774 | 61898.9 |
| ldh family oxidoreductase | K8M09_11885 | Q1QWN5 | + | 2382924 - 2383928 | 34781.8 |
| sugar kinase | K8M09_11890 | P45416 | + | 2383945 - 2384859 | 32612.8 |
| ribosome biogenesis gtpase der | K8M09_11895 | C3MG60 | - | 2384863 - 2386293 | 52853.4 |
| tetratricopeptide repeat protein | K8M09_11900 | Not Available | - | 2386331 - 2387002 | 24071.5 |
| nnru family protein | K8M09_11905 | Not Available | - | 2387105 - 2387689 | 20872.9 |
| polysaccharide deacetylase | K8M09_11910 | Not Available | + | 2387844 - 2388833 | 36120.8 |
| peptide antibiotic transporter sbma | K8M09_11915 | Q08120 | - | 2388840 - 2390117 | 48371.7 |
| mfs transporter | K8M09_11920 | P39381 | - | 2390203 - 2391393 | 39887.0 |
| type i methionyl aminopeptidase | K8M09_11925 | Q8CRU9 | - | 2391470 - 2392222 | 26820.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.