Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| choline abc transporter permease subunit | K8M09_11830 | P46921 | + | 2372458 - 2373327 | 30770.9 |
| choline abc transporter atp-binding protein | K8M09_11835 | E0SCY1 | + | 2373327 - 2374367 | 37096.9 |
| hugz family protein | K8M09_11840 | Not Available | + | 2374447 - 2375211 | 27861.3 |
| metalloregulator arsr/smtb family transcription factor | K8M09_11845 | P28267 | + | 2375382 - 2375714 | 11855.4 |
| aspartate aminotransferase family protein | K8M09_11850 | Q9A3Q9 | + | 2375883 - 2377208 | 48279.0 |
| gnat family n-acetyltransferase | K8M09_11855 | P9WQG4 | - | 2377412 - 2377900 | 17647.2 |
| aldose 1-epimerase family protein | K8M09_11860 | P42096 | + | 2378008 - 2378877 | 31505.2 |
| adenine deaminase | K8M09_11865 | Q7CXF0 | + | 2378953 - 2380647 | 60950.8 |
| duf4160 domain-containing protein | K8M09_11870 | Not Available | + | 2380655 - 2380900 | 9442.31 |
| duf2442 domain-containing protein | K8M09_11875 | Not Available | + | 2380881 - 2381126 | 8867.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.