Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1993 domain-containing protein | K8M09_11780 | Not Available | + | 2361024 - 2361530 | 18104.8 |
| formate--tetrahydrofolate ligase | K8M09_11785 | C3MFQ8 | - | 2361574 - 2363253 | 59997.7 |
| duf2333 family protein | K8M09_11790 | Not Available | - | 2363333 - 2364472 | 42912.2 |
| hypothetical protein | K8M09_11795 | Not Available | - | 2364465 - 2365766 | 49559.1 |
| atp-binding protein | K8M09_11800 | Not Available | - | 2365777 - 2367687 | 69900.9 |
| hypothetical protein | K8M09_11805 | Not Available | - | 2367689 - 2368837 | 42674.9 |
| hypothetical protein | K8M09_11810 | Not Available | - | 2368887 - 2369975 | 40950.7 |
| cytochrome c family protein | K8M09_11815 | Q8UJ37 | - | 2370149 - 2370526 | 12989.7 |
| thymidine kinase | K8M09_11820 | Q92N38 | - | 2370549 - 2371136 | 21685.9 |
| choline abc transporter substrate-binding protein | K8M09_11825 | Q9L4K3 | + | 2371365 - 2372324 | 33899.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.