Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma factor | K8M09_11730 | Not Available | + | 2347819 - 2348670 | 30532.0 |
| 2-isopropylmalate synthase | K8M09_11735 | Q8UD63 | - | 2348743 - 2350449 | 62720.8 |
| atp-dependent clp protease proteolytic subunit | K8M09_11740 | Q2K5Q0 | - | 2350838 - 2351416 | 21227.4 |
| hupe/urej family protein | K8M09_11745 | P27650 | + | 2351678 - 2352256 | 19096.1 |
| cation diffusion facilitator family transporter | K8M09_11750 | P74068 | - | 2352321 - 2353241 | 31773.0 |
| anthranilate synthase | K8M09_11755 | P15395 | - | 2353531 - 2355720 | 80439.0 |
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | K8M09_11760 | Q9JWA2 | - | 2355979 - 2358240 | 81713.5 |
| hypothetical protein | K8M09_11765 | Not Available | + | 2358589 - 2358897 | 11437.7 |
| extensin family protein | K8M09_11770 | Not Available | + | 2359098 - 2359697 | 21131.0 |
| porin family protein | K8M09_11775 | P0A3U4 | + | 2359966 - 2360742 | 26772.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.