Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4159 domain-containing protein | K8M09_11680 | Not Available | + | 2337538 - 2340342 | 98145.0 |
| hypothetical protein | K8M09_11685 | Not Available | + | 2340344 - 2342416 | 74929.6 |
| voc family protein | K8M09_11690 | Not Available | + | 2342594 - 2343130 | 20223.3 |
| n-acetyltransferase | K8M09_11695 | P63419 | - | 2343150 - 2343668 | 18694.5 |
| hypothetical protein | K8M09_11700 | Not Available | + | 2343655 - 2343825 | 6104.56 |
| glutathione s-transferase family protein | K8M09_11705 | P42620 | + | 2343950 - 2344936 | 37145.1 |
| nudix domain-containing protein | K8M09_11710 | P46351 | - | 2344953 - 2345441 | 17992.6 |
| metallophosphoesterase | K8M09_11715 | Not Available | + | 2345552 - 2346454 | 32948.4 |
| hypothetical protein | K8M09_11720 | Not Available | + | 2346559 - 2347137 | 21509.4 |
| rna polymerase sigma factor | K8M09_11725 | Q7AKG9 | + | 2347298 - 2347816 | 19453.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.