Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hemolysin family protein | K8M09_11630 | P74409 | - | 2329501 - 2330781 | 46070.1 |
| hypothetical protein | K8M09_11635 | Not Available | - | 2330905 - 2331162 | 10178.2 |
| oxygen-dependent coproporphyrinogen oxidase | K8M09_11640 | Q92PD8 | + | 2331339 - 2332250 | 34330.6 |
| hypothetical protein | K8M09_11645 | Not Available | + | 2332337 - 2332567 | 8283.57 |
| duf1059 domain-containing protein | K8M09_11650 | Not Available | + | 2332716 - 2332907 | 7177.54 |
| cca trna nucleotidyltransferase | K8M09_11655 | Q8K1J6 | - | 2332918 - 2334177 | 44944.4 |
| coa pyrophosphatase | K8M09_11660 | A8AFP5 | - | 2334174 - 2334806 | 23403.8 |
| duf1285 domain-containing protein | K8M09_11665 | Not Available | - | 2334803 - 2335420 | 21860.5 |
| moxr family atpase | K8M09_11670 | P94474 | + | 2335594 - 2336607 | 36164.9 |
| duf58 domain-containing protein | K8M09_11675 | P9WLX4 | + | 2336621 - 2337541 | 33897.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.