Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K8M09_11530 | A0A3G5BID2 | + | 2309256 - 2309858 | 21813.4 |
| benzoate/h(+) symporter bene family transporter | K8M09_11535 | P76103 | + | 2309983 - 2311167 | 39384.1 |
| hypothetical protein | K8M09_11540 | Not Available | - | 2311169 - 2312623 | 52413.5 |
| 50s ribosomal protein l25/general stress protein ctc | K8M09_11545 | Q8UDA0 | + | 2312865 - 2313467 | 21525.9 |
| eal domain-containing protein | K8M09_11550 | Q9ABX9 | + | 2313694 - 2316087 | 87563.1 |
| transporter substrate-binding domain-containing protein | K8M09_11555 | Q06758 | + | 2316107 - 2316856 | 27363.3 |
| aminoacyl-trna hydrolase | K8M09_11560 | Q2K5U1 | + | 2316925 - 2317638 | 25558.9 |
| atp-dependent clp protease adapter clps | K8M09_11565 | Q92N66 | - | 2317643 - 2317954 | 11589.1 |
| redox-regulated atpase ychf | K8M09_11570 | Q9CP90 | + | 2318113 - 2319216 | 39494.3 |
| maoc family dehydratase | K8M09_11575 | P96670 | + | 2319364 - 2319834 | 17022.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.