Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pp_02254 | K8M09_11480 | Not Available | - | 2300623 - 2300964 | Not Available |
| pyrroline-5-carboxylate reductase | K8M09_11485 | P22008 | - | 2300984 - 2301802 | 27577.4 |
| ybjn domain-containing protein | K8M09_11490 | Not Available | - | 2301805 - 2302305 | 18755.1 |
| accessory factor ubik family protein | K8M09_11495 | Not Available | - | 2302698 - 2302955 | 9460.34 |
| prolipoprotein diacylglyceryl transferase | K8M09_11500 | Q8UDB4 | + | 2303195 - 2304007 | 29268.2 |
| class i sam-dependent methyltransferase | K8M09_11505 | Q9VGR2 | + | 2304020 - 2305120 | 39471.3 |
| peptidoglycan editing factor pgef | K8M09_11510 | A0A384KG77 | + | 2305222 - 2306013 | 28959.3 |
| xaa-pro peptidase family protein | K8M09_11515 | P55667 | + | 2306040 - 2307191 | 42532.8 |
| hypothetical protein | K8M09_11520 | Not Available | + | 2307291 - 2308049 | 25972.5 |
| ribose-phosphate pyrophosphokinase | K8M09_11525 | Q92N73 | + | 2308176 - 2309108 | 33660.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.