Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | K8M09_11430 | P55390 | + | 2293691 - 2293906 | 7511.83 |
| ba14k family protein | K8M09_11435 | Not Available | + | 2294042 - 2294467 | 16020.7 |
| mbl fold metallo-hydrolase | K8M09_11440 | P75849 | - | 2294518 - 2295159 | 23071.5 |
| hypothetical protein | K8M09_11445 | Not Available | - | 2295297 - 2295458 | 5621.0 |
| lrp/asnc family transcriptional regulator | K8M09_11450 | O07920 | - | 2295566 - 2296024 | 17242.0 |
| 4-hydroxyphenylpyruvate dioxygenase | K8M09_11455 | O06695 | + | 2296155 - 2297258 | 40932.3 |
| hypothetical protein | K8M09_11460 | Not Available | + | 2297502 - 2297765 | 8052.26 |
| marr family transcriptional regulator | K8M09_11465 | P31078 | + | 2297946 - 2298422 | 17879.4 |
| response regulator transcription factor | K8M09_11470 | P31079 | + | 2298447 - 2299154 | 26493.1 |
| hamp domain-containing protein | K8M09_11475 | Q9HZ47 | + | 2299240 - 2300622 | 51995.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.