Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | K8M09_11280 | P44074 | - | 2261309 - 2262037 | 26856.9 |
| sdr family oxidoreductase | K8M09_11285 | P50199 | + | 2262255 - 2263025 | 26686.9 |
| dna helicase recq | K8M09_11290 | P15043 | - | 2263044 - 2264918 | 68413.7 |
| voc family protein | K8M09_11295 | Not Available | + | 2265061 - 2265444 | 13207.2 |
| dna primase | K8M09_11300 | Q8FDG5 | - | 2265510 - 2267501 | 73454.4 |
| gatb/yqey domain-containing protein | K8M09_11305 | P54464 | - | 2267638 - 2268087 | 16422.1 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | K8M09_11310 | Q92N95 | + | 2268410 - 2269618 | 42883.9 |
| mate family efflux transporter | K8M09_11315 | Q92PZ0 | - | 2269698 - 2271074 | 48649.9 |
| tcr/tet family mfs transporter | K8M09_11320 | P02982 | - | 2271225 - 2272478 | 44331.0 |
| hypothetical protein | K8M09_11325 | Not Available | + | 2272432 - 2272611 | 6950.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.