Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1428 family protein | K8M09_11230 | P0AAQ8 | - | 2250780 - 2251133 | 13378.8 |
| duf1801 domain-containing protein | K8M09_11235 | Not Available | - | 2251209 - 2251604 | 14273.4 |
| alpha/beta-hydrolase family protein | K8M09_11240 | Not Available | + | 2251765 - 2253411 | 60840.1 |
| abc transporter substrate-binding protein | K8M09_11245 | Q1MDE9 | - | 2253488 - 2254594 | 37507.7 |
| hypothetical protein | K8M09_11250 | Not Available | + | 2254895 - 2255467 | 21604.7 |
| rna polymerase sigma factor rpod | K8M09_11255 | P33452 | - | 2255563 - 2257614 | 77286.7 |
| gfa family protein | K8M09_11260 | Q9CXS4 | - | 2258034 - 2258381 | 12762.3 |
| l-threonine 3-dehydrogenase | K8M09_11265 | Q1MDT5 | - | 2258428 - 2259465 | 37393.6 |
| glycine c-acetyltransferase | K8M09_11270 | P37419 | - | 2259498 - 2260685 | 42537.0 |
| gfa family protein | K8M09_11275 | Not Available | - | 2260735 - 2261190 | 16155.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.