Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1989 domain-containing protein | K8M09_11030 | Q10082 | - | 2217940 - 2218800 | 31336.1 |
| patatin-like phospholipase family protein | K8M09_11035 | Not Available | + | 2219002 - 2220072 | 39375.5 |
| pyrimidine dimer dna glycosylase/endonuclease v | K8M09_11040 | P04418 | + | 2220459 - 2220842 | 14485.5 |
| hypothetical protein | K8M09_11045 | Not Available | - | 2221079 - 2221720 | 24433.3 |
| is481 family transposase | K8M09_11050 | Not Available | + | 2222375 - 2222545 | 6488.81 |
| hypothetical protein | K8M09_11205 | Not Available | + | 2247684 - 2248184 | 17086.5 |
| Trna-met | Not Available | Not Available | + | 2248452 - 2248527 | Not Available |
| simpl domain-containing protein | K8M09_11215 | Q44642 | + | 2248684 - 2249436 | 25889.2 |
| hypothetical protein | K8M09_11220 | Not Available | - | 2249655 - 2250062 | 15325.3 |
| nuclear transport factor 2 family protein | K8M09_11225 | Not Available | - | 2250174 - 2250524 | 12371.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.