Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | K8M09_10930 | A1JI47 | + | 2198773 - 2199630 | 31659.6 |
| hypothetical protein | K8M09_10935 | Not Available | + | 2199688 - 2199942 | 9712.56 |
| sdr family oxidoreductase | K8M09_10940 | A7AZH2 | - | 2199946 - 2200722 | 26729.2 |
| hypothetical protein | K8M09_10945 | Not Available | - | 2200909 - 2201130 | 8125.93 |
| hamp domain-containing histidine kinase | K8M09_10950 | P40719 | - | 2201297 - 2202643 | 48188.2 |
| response regulator transcription factor | K8M09_10955 | Q9HV32 | - | 2202640 - 2203296 | 23611.5 |
| phosphoethanolamine transferase | K8M09_10960 | P30845 | - | 2203394 - 2205031 | 59888.0 |
| hypothetical protein | K8M09_10965 | Not Available | + | 2205197 - 2205340 | 5281.65 |
| glutathione s-transferase family protein | K8M09_10970 | Q83AY0 | + | 2205417 - 2206076 | 25080.7 |
| hypothetical protein | K8M09_10975 | Not Available | - | 2206073 - 2206435 | 12942.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.