Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | K8M09_10880 | P37499 | + | 2185646 - 2186554 | 32895.5 |
| abc transporter substrate-binding protein | K8M09_10885 | P76108 | + | 2186728 - 2187888 | 42679.5 |
| abc transporter atp-binding protein | K8M09_10890 | P77795 | + | 2188074 - 2189069 | 35673.0 |
| abc transporter permease | K8M09_10895 | P77156 | + | 2189066 - 2190016 | 35072.9 |
| abc transporter permease | K8M09_10900 | P0AFR9 | + | 2190006 - 2190821 | 29374.2 |
| gamma-aminobutyraldehyde dehydrogenase | K8M09_10905 | Q3Z1H6 | + | 2190843 - 2192270 | 51030.8 |
| hypothetical protein | K8M09_10910 | Not Available | + | 2192406 - 2192921 | 18605.3 |
| isocitrate lyase/phosphoenolpyruvate mutase family protein | K8M09_10915 | P9WLN8 | - | 2192923 - 2193750 | 28969.7 |
| fad-dependent oxidoreductase | K8M09_10920 | Q8GAI3 | - | 2193750 - 2196197 | 90061.6 |
| fad-dependent oxidoreductase | K8M09_10925 | Q9DBT9 | - | 2196194 - 2198644 | 91303.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.