Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | K8M09_10830 | O34421 | + | 2174172 - 2175332 | 43016.2 |
| acetate--coa ligase family protein | K8M09_10835 | A0A2P1BT06 | + | 2175338 - 2177398 | 71709.8 |
| crotonobetainyl-coa hydratase | K8M09_10840 | A9MR28 | + | 2177395 - 2178177 | 28535.3 |
| abc transporter substrate-binding protein | K8M09_10845 | A0A0H2ZGV2 | + | 2178326 - 2179915 | 58804.5 |
| abc transporter permease | K8M09_10850 | Q8X6V7 | + | 2179900 - 2181024 | 39494.0 |
| abc transporter permease | K8M09_10855 | A0A0H2ZFV0 | + | 2181021 - 2181848 | 29381.7 |
| abc transporter atp-binding protein | K8M09_10860 | Q0TJM0 | + | 2181841 - 2183472 | 59282.1 |
| paar domain-containing protein | K8M09_10865 | Not Available | - | 2183848 - 2184201 | 12099.7 |
| act domain-containing protein | K8M09_10870 | Not Available | - | 2184198 - 2184614 | 14446.3 |
| alpha/beta hydrolase | K8M09_10875 | P71668 | - | 2184611 - 2185522 | 32650.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.