Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase family protein | K8M09_10680 | O88070 | - | 2141746 - 2143116 | 51311.7 |
| trap transporter substrate-binding protein | K8M09_10685 | Q8YSQ6 | - | 2143191 - 2144243 | 38300.2 |
| trap transporter large permease subunit | K8M09_10690 | Q9HU16 | - | 2144374 - 2145696 | 47901.9 |
| trap transporter small permease subunit | K8M09_10695 | Not Available | - | 2145693 - 2146202 | 19197.8 |
| n-formylglutamate amidohydrolase | K8M09_10700 | Not Available | - | 2146337 - 2147098 | 27428.7 |
| murr/rpir family transcriptional regulator | K8M09_10705 | Q88P32 | + | 2147270 - 2148169 | 33097.6 |
| abc transporter substrate-binding protein | K8M09_10710 | P55454 | + | 2148268 - 2149374 | 39113.3 |
| abc transporter permease subunit | K8M09_10715 | Q8RVC7 | + | 2149459 - 2150349 | 31969.9 |
| abc transporter permease | K8M09_10720 | P0A2J8 | + | 2150346 - 2151128 | 28545.0 |
| abc transporter atp-binding protein | K8M09_10725 | Q1QE80 | + | 2151138 - 2152199 | 37676.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.