Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| porin family protein | K8M09_10580 | P0A3U4 | + | 2117149 - 2117814 | 23287.9 |
| glycoside hydrolase family 25 protein | K8M09_10585 | Q8FFY2 | + | 2117972 - 2118754 | 29328.4 |
| lytic murein transglycosylase | K8M09_10590 | P41052 | + | 2118886 - 2120088 | 42838.1 |
| dmt family transporter | K8M09_10595 | F8JJ22 | + | 2120202 - 2121131 | 32379.0 |
| methylenetetrahydrofolate reductase | K8M09_10600 | P0AEZ1 | - | 2121612 - 2122517 | 31980.1 |
| metalloregulator arsr/smtb family transcription factor | K8M09_10605 | O31474 | - | 2122519 - 2123526 | 36925.3 |
| energy-dependent translational throttle protein etta | K8M09_10610 | P9WQK2 | - | 2123674 - 2125323 | 60776.4 |
| hypothetical protein | K8M09_10615 | Not Available | - | 2125426 - 2127231 | 62917.3 |
| ribonuclease | K8M09_10620 | Not Available | - | 2127304 - 2128053 | 25897.4 |
| alpha/beta hydrolase | K8M09_10625 | Q99685 | + | 2128226 - 2129185 | 34468.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.