Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phospho-n-acetylmuramoyl-pentapeptide- transferase | K8M09_10480 | C3MEN2 | - | 2095765 - 2096865 | 38831.5 |
| udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligase | K8M09_10485 | Q9AKP1 | - | 2096979 - 2098412 | 50107.1 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | K8M09_10490 | Q92NL6 | - | 2098409 - 2099860 | 50296.1 |
| penicillin-binding protein 2 | K8M09_10495 | B8H0A0 | - | 2099925 - 2101670 | 62618.4 |
| hypothetical protein | K8M09_10500 | Not Available | - | 2101670 - 2102065 | 14545.5 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | K8M09_10505 | Q92NL4 | - | 2102069 - 2103094 | 35897.9 |
| division/cell wall cluster transcriptional repressor mraz | K8M09_10510 | B9JH60 | - | 2103109 - 2103549 | 16347.5 |
| glycosyltransferase family 4 protein | K8M09_10515 | Not Available | + | 2104091 - 2105341 | 45537.6 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 2105371 - 2105766 | Not Available |
| fad-dependent oxidoreductase | K8M09_10525 | P40859 | - | 2105808 - 2106989 | 41971.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.