Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase p family protein | K8M09_10380 | Q8RY11 | + | 2069941 - 2071776 | 65810.8 |
| azld family protein | K8M09_10385 | Not Available | - | 2071766 - 2072080 | 11007.2 |
| azlc family abc transporter permease | K8M09_10390 | P76630 | - | 2072083 - 2072817 | 25996.9 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | K8M09_10395 | C3MEL6 | - | 2072945 - 2073769 | 29271.6 |
| pantoate--beta-alanine ligase | K8M09_10400 | C3MEL7 | - | 2073771 - 2074640 | 31441.2 |
| dead/deah box helicase | K8M09_10405 | Q0D8N0 | + | 2074922 - 2076997 | 76751.4 |
| nad-dependent dna ligase liga | K8M09_10410 | Q1ME47 | - | 2077077 - 2079236 | 78551.1 |
| dna repair protein recn | K8M09_10415 | Q9K974 | - | 2079475 - 2081145 | 59866.0 |
| outer membrane protein assembly factor bamd | K8M09_10420 | Q98KC1 | - | 2081224 - 2082090 | 32026.9 |
| udp-3-o-acyl-n-acetylglucosamine deacetylase | K8M09_10425 | B2S6P7 | - | 2082240 - 2083196 | 34523.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.