Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux rnd transporter permease subunit | K8M09_10280 | P31224 | - | 2048853 - 2051987 | 111149.0 |
| efflux rnd transporter periplasmic adaptor subunit | K8M09_10285 | P0AE07 | - | 2051999 - 2053300 | 45674.9 |
| abc transporter atp-binding protein | K8M09_10290 | P54933 | - | 2053479 - 2054480 | 36235.8 |
| gfo/idh/moca family oxidoreductase | K8M09_10295 | B5F3F4 | - | 2054493 - 2055557 | 38739.4 |
| carbohydrate abc transporter permease | K8M09_10300 | P40980 | - | 2055554 - 2056393 | 30473.1 |
| sugar abc transporter permease | K8M09_10305 | O32155 | - | 2056409 - 2057359 | 35162.0 |
| abc transporter substrate-binding protein | K8M09_10310 | Q00749 | - | 2057643 - 2058902 | 45695.0 |
| n-acetylmuramic acid 6-phosphate etherase | K8M09_10315 | Q1J3J3 | - | 2058948 - 2059841 | 29968.9 |
| n-acetylglucosamine kinase | K8M09_10320 | Q9KUA9 | + | 2060039 - 2060926 | 30539.4 |
| gntr family transcriptional regulator | K8M09_10325 | O34817 | + | 2060923 - 2061687 | 27781.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.