Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thymidylate synthase | K8M09_10180 | Q92NQ5 | - | 2024610 - 2025404 | 29997.8 |
| duf2853 family protein | K8M09_10185 | Not Available | - | 2025492 - 2025803 | 11225.5 |
| eal domain-containing protein | K8M09_10190 | Q9I310 | + | 2026038 - 2027366 | 49159.2 |
| Tmrna,resume consensus sequence (at 207): tgtagttgcaaacgacaa | Not Available | Not Available | + | 2027420 - 2027762 | Not Available |
| sspb family protein | K8M09_10200 | Not Available | + | 2027867 - 2028388 | 19228.5 |
| duf4169 family protein | K8M09_10205 | Not Available | + | 2028398 - 2028610 | 7957.28 |
| ribbon-helix-helix domain-containing protein | K8M09_10210 | Not Available | + | 2028740 - 2028991 | 9136.73 |
| asma family protein | K8M09_10215 | Not Available | - | 2029020 - 2032799 | 132254.0 |
| fad-binding protein | K8M09_10220 | F1QXM5 | - | 2032842 - 2034263 | 50247.1 |
| efflux rnd transporter permease subunit | K8M09_10225 | Q57124 | - | 2034343 - 2037501 | 111755.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.