Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase 3 large subunit | K8M09_10130 | P45261 | - | 2013289 - 2015067 | 64673.5 |
| duf87 domain-containing protein | K8M09_10135 | Q8U1P0 | + | 2015391 - 2017439 | 74745.2 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | K8M09_10140 | Q92NR2 | - | 2017497 - 2018432 | 33671.8 |
| phosphoserine phosphatase serb | K8M09_10145 | Q12A06 | + | 2018431 - 2019321 | 31097.7 |
| gnat family n-acetyltransferase | K8M09_10150 | Q9HX72 | + | 2019321 - 2019887 | 21186.5 |
| degq family serine endoprotease | K8M09_10155 | Q2YMX6 | - | 2019962 - 2021491 | 53039.8 |
| duf2065 domain-containing protein | K8M09_10160 | Not Available | - | 2021616 - 2021804 | 6830.66 |
| protease modulator hflc | K8M09_10165 | P0ABC5 | - | 2021815 - 2022756 | 35262.4 |
| ftsh protease activity modulator hflk | K8M09_10170 | P40605 | - | 2022756 - 2023874 | 40527.7 |
| dihydrofolate reductase | K8M09_10175 | P12833 | - | 2024073 - 2024594 | 18848.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.