Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m20/m25/m40 family metallo-hydrolase | K8M09_10030 | P54551 | + | 1994365 - 1996014 | 59407.2 |
| plp-dependent aminotransferase family protein | K8M09_10035 | H3ZPL1 | - | 1996166 - 1997389 | 43925.7 |
| ketol-acid reductoisomerase | K8M09_10040 | Q8UDV0 | - | 1997848 - 1998867 | 36555.0 |
| tetr/acrr family transcriptional regulator c-terminal domain-containing protein | K8M09_10045 | Not Available | - | 1998927 - 1999574 | 22922.7 |
| hypothetical protein | K8M09_10050 | Not Available | + | 1999990 - 2000370 | 13917.4 |
| hypothetical protein | K8M09_10055 | Not Available | + | 2000536 - 2000898 | 12126.3 |
| cold-shock protein | K8M09_10060 | P55390 | + | 2001154 - 2001363 | 7475.81 |
| lrp/asnc family transcriptional regulator | K8M09_10065 | F8DT24 | - | 2001422 - 2001886 | 17267.0 |
| aspartate/glutamate racemase family protein | K8M09_10070 | A0A0H3JGH6 | + | 2002055 - 2002768 | 25146.5 |
| fad-dependent monooxygenase | K8M09_10075 | Q9HWG9 | - | 2002775 - 2004019 | 44092.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.