Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K8M09_09680 | Not Available | + | 1926358 - 1926705 | 12542.0 |
| lysr family transcriptional regulator | K8M09_09685 | P16931 | - | 1926690 - 1927574 | 31685.0 |
| hypothetical protein | K8M09_09690 | Not Available | + | 1927672 - 1927971 | 11485.0 |
| von willebrand factor type a domain-containing protein | K8M09_09695 | P76481 | - | 1928005 - 1930083 | 73583.8 |
| rna polymerase sigma factor | K8M09_09700 | Q45585 | - | 1930099 - 1930620 | 19550.2 |
| phosphodiester glycosidase family protein | K8M09_09705 | P27840 | - | 1930699 - 1931391 | 25062.1 |
| ferredoxin | K8M09_09710 | Not Available | - | 1931499 - 1932191 | 25020.8 |
| trimethylamine methyltransferase family protein | K8M09_09715 | Q24SP7 | - | 1932299 - 1933870 | 56979.5 |
| b12-binding domain-containing protein | K8M09_09720 | Q24SP8 | + | 1934236 - 1934931 | 25192.7 |
| entericidin | K8M09_09725 | Not Available | - | 1935023 - 1935181 | 5341.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.