Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | K8M09_09630 | P29931 | - | 1915439 - 1915963 | 19014.1 |
| peptidoglycan-binding protein | K8M09_09635 | Not Available | - | 1916534 - 1918393 | 65665.9 |
| cobyric acid synthase | K8M09_09640 | P29932 | - | 1918545 - 1920008 | 51383.7 |
| hypothetical protein | K8M09_09645 | Not Available | + | 1920161 - 1920394 | 8871.62 |
| hypothetical protein | K8M09_09650 | Not Available | + | 1920425 - 1920808 | 14341.6 |
| abc transporter substrate-binding protein | K8M09_09655 | Not Available | + | 1920993 - 1921991 | 35869.6 |
| glycine betaine/l-proline abc transporter atp-binding protein | K8M09_09660 | P46920 | + | 1922212 - 1923255 | 37849.0 |
| betaine--homocysteine s-methyltransferase | K8M09_09665 | Q55786 | + | 1923376 - 1924392 | 35327.2 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | K8M09_09670 | Q84CG1 | - | 1924461 - 1925588 | 41497.9 |
| pas domain-containing protein | K8M09_09675 | Q9HXE2 | - | 1925585 - 1926232 | 23035.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.