Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cadmium-translocating p-type atpase | K8M09_09480 | P18398 | - | 1884525 - 1886819 | 80210.6 |
| fixh family protein | K8M09_09485 | P18397 | - | 1886816 - 1887313 | 17851.5 |
| cytochrome c oxidase accessory protein ccog | K8M09_09490 | P18396 | - | 1887313 - 1888884 | 58653.0 |
| srpbcc family protein | K8M09_09495 | Not Available | + | 1889072 - 1889488 | 15294.1 |
| voc family protein | K8M09_09500 | Q9ZAU2 | + | 1889485 - 1889841 | 12817.0 |
| cytochrome-c oxidase, cbb3-type subunit iii | K8M09_09505 | Q05577 | - | 1889887 - 1890750 | 30592.2 |
| cbb3-type cytochrome c oxidase subunit 3 | K8M09_09510 | Not Available | - | 1890753 - 1890905 | 5657.96 |
| cytochrome-c oxidase, cbb3-type subunit ii | K8M09_09515 | Not Available | - | 1890916 - 1891647 | 27180.5 |
| cytochrome-c oxidase, cbb3-type subunit i | K8M09_09520 | Q05572 | - | 1891659 - 1893278 | 60871.9 |
| hemerythrin domain-containing protein | K8M09_09525 | Not Available | + | 1893487 - 1893969 | 17978.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.